New insights in cell death in plants might generate new leads for weed control

Sequoia trees (large view)

Sequoia trees

(14-08-2018) Ironically, most of a tree’s biomass is actually not alive. It is formed by persistent cell corpses collectively called wood. The formation of wood is one of the many programmed cell death processes important for plant growth & development.

The lab of Prof. Moritz Nowack (VIB-UGent Center for Plant Systems Biology) investigates the regulation of these plant cell death processes in the model plant Arabidopsis.

Dr. Huysmans, first author of this study: “To study plant cell death, we are using the plant’s root cap as a model system. The root cap is situated at the tip of the growing root, guiding and protecting the delicate root tip as it pushes through the soil. Individual root cap cells are constantly regenerated and have a short life span that ends in programmed cell death.”

In this project, the researchers aimed at discovering new genes that control the cell death process in plants. To this end, they studied transcription factors, which regulate gene expression as the starting point of protein production. The regulated production of proteins is an important first step to ensure the orderly execution of cell death.

Huysmans: “To identify regulators of cell death, we compared which transcription factors are produced both in wood cells and in root cap cells. As both cell types undergo programmed cell death, we hoped to identify important regulators of this process. We found a number of common transcription factors and analyzed two of them, ANAC087 and ANAC046, in detail.”

In mutants that abnormally produced these factors outside the root cap, the team of Nowack found that many cells died within 24 hours, leading to growth arrest and seedling death. Conversely, when analyzing mutants that were unable to produce ANAC087 and ANAC046, they found that root cap cells lived much longer than in regular Arabidopsis plants.

Moritz Nowack (VIB-UGent Center for Plant Systems Biology): “These results show that both transcription factors are important regulators of programmed cell death in Arabidopsis. Surprisingly, our results also revealed that root cap cells that are detached from the roots and reside in the rhizosphere have a genetically determined life span.”

Identifying transcription factors controlling the cell death program is but a first step. To find the proteins that do the actual killing job, target genes controlled by ANAC087 and ANAC046 need to be analyzed.

Moritz Nowack: “Ultimately, we strive to understand the complex network of proteins that is necessary to execute cell death in plants. This knowledge might generate new leads on how to control cell death in weeds and crop plants. Inducing naturally occurring cell death in weeds would be an environment-friendly way for weed control, while optimizing cell death processes in crop plants could contribute to stabilization of plant yield under adverse environmental conditions."

Publication

ANAC087 and ANAC046 control distinct aspects of programmed cell death in the Arabidopsis columella and lateral root cap, Huysmans et al., Plant Cell 2018

Info

Prof. Moritz Nowack
Department of Plant Biotechnology and Bioinformatics
T 09 331 38 52
Moritz.Nowack@ugent.vib.be